Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAPSRLQLGLRAAYSGISSVAGFSIFLVWTVVYRQPGTAAMGGLAGVLALWVLVTHVMYMQDYWRTWLKGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDPTSYYLSSVWSFISFKWAFLLSLYAHRYRADFADISILSDF |
1B4G Chain:A ((5-11)) | ---------------------------------------------------------------------------------------------------------------VCVSSYRGRKSGNKPPSKTCLKEEMA--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 0 for 6 contacts (0.0/contact) +
2D Compatibility (PS) -591 + (NN) 340 + (LL) 10868
1D Compatibility (HY) 400 + (ID) 50
Total energy: 10967.0 ( 1827.83 by residue)
QMean score : -0.407
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