Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAATASAGAGGIDGKPRTSPKSVKFLFGGLAGMGATVFVQPLD----LVKNRMQLSGEGAKTREYKTSFHALTSILKAEGLRGIYTGLSAGLLR----QATYTTTRLGIYTVL-FERLTGADGTPPGFLLKAVIGMTAGATGAFVGTPAEVALIRMTADGRLPADQRRGYKNVFNALIRITRE----EGVLTLWRGCIPTMARAVVVNAAQLASYSQSKQFLLDSGYFSDNILCHFCASMISGLVTTAA---SMPVDIAKTRIQNMRMIDGKP-EYKNGLDVLFKVVRYEGFFSLWKGFTPYYARLGPHTVLTFIFLEQMNKAYKRLFLSG |
| 4C9H Chain:A ((25-287)) | ----------------------IDFLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFKK---EEGYAKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADS----------ARQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLK-------------LASF---LLGWVVTTGASTCSYPLDTVRRR---MMMTSGQAVKYDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGVISMYDQLQMILFGKKFK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41199 for 1561 contacts (-26.4/contact) +
2D Compatibility (PS) -23459 + (NN) 922 + (LL) 2008
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -78728.0 ( -50.43 by residue)
QMean score : 0.208
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