Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGQTRLLVVDQETDEELRRRQLTCTEEMAQRGLPPAHDPWEPKPDWAHTGSHSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDEARLLVVDPETDEHFKRLRVTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSRSDLPGSDKDTEDGSAWKQDPFQESGLHLSPTAAEAKEKARAMRVNKRAPQMDWNRKREIFSNF
2KJD Chain:A ((4-120))----------------------------------------------------------------------------------------------------------------------------------------------PFTMLRPRLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSR----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2KJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37383 for 836 contacts (-44.7/contact) +
2D Compatibility (PS) -12185 + (NN) -6491 + (LL) 10516
1D Compatibility (HY) -11200 + (ID) 3900
Total energy: -60643.0 ( -72.54 by residue)
QMean score : 0.605

(partial model without unconserved sides chains):
PDB file : Tito_2KJD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KJD-query.scw
PDB file : Tito_Scwrl_2KJD.pdb: