Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSGPGIQAAIDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGLRGFYKGTGPALMAYVAENSVLF-------MCYGFCQQ-FVRKVAGMDKQAKLSDLQTAAAGSFASAFAALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKGILKKDGPLGFYHGLSSTLLQEVPGYFFFFGGYELSRSFFASGRSKDELGPVHLMLSGGVAGICL------WLVV-------FPVDCIKSRIQVLSMYG-KQAGFIGTLLSVVRNEGIVALYSGLKATMIRAIPANGALFVAYEYSRKMMMKQLEAY |
4C9Q Chain:A ((35-306)) | -----GVSAAIAKTAASPIERVKILI-QNQDEM-IKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMFGFKKEGYGKWFAG-----------NLASGGAAGALSLLFVYSLDFARTRLAADAKS------ARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMF-------------DSLKP--L---------FLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMILFGK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93155 for 1738 contacts (-53.6/contact) +
2D Compatibility (PS) -24428 + (NN) -1421 + (LL) 3044
1D Compatibility (HY) -16000 + (ID) 3600
Total energy: -135560.0 ( -78.00 by residue)
QMean score : 0.159
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