Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTVDDILEQVGESGWFQKQAFLILCLLSAAFAPICVGIVFLGFTPDHHCQSPGVAELSQRCGWSPAEELNYTVPGLGPAGEAFLGQCRRYEVDWNQSALSCVDPLASLATNRSHLPLGPCQDGWVYDTPGSSIVTEFNLVCADSWKLDLFQSCLNAGFLFGSLGVGYFADRFGRKLCLLGTVLVNAVSGVLMAFSPNYMS-------MLLFRLLQGLVSKGNWMAGYTLITEFVGSGSRRTV-----AIMYQMAFT---VGLVALTGLAYALPH---------WRWLQLAVSLPTFLFLLYYWCVPESPRWLLSQKRNTEAIKIMDHIAQKNGKLPPADLKMLSLEEDVTEKLS-PSFADLFRTPRLRKRTFILMYLWFTDSVLYQGLILH---------MGATSGNLYL--------DFLYSALVEIPGAFIALITIDRVGRIYPMAMSNLLAGAACLVMIFISPDLHWLNI--IIMCVGRMGITI---AIQMICLVNAELYPTFVRNLGVMVCSSLCDIGGIITPFIVFRLR-EVWQALPLILFAVLGLLAAGVTLLLPETKGVALPETMKDAENLGRKAKPKENTIYLKVQTSEPSGT |
| 4J05 Chain:A ((75-520)) | --------------------------------------------------------------------------------------------------------------------------------------------------RQDLMKAAANIGCVVGQVMFGVLGDSFGRKFVYGKELILIIVATIFQMSAPSHWDGNRVLTWITICRVFLGIGIGGDYPMSATVVSDRANIHRRGTLLCFIFANQGWGSFVGSLVTIVTISGFKHRLKSGHTHDVDKAWRILIGLSLIPAFGTLYQR----------------------------------------------------WQEFVAYFSTWNHFRNLLGSMLGWFLVDIAFYGINLNQSVVLAQIGFAGKTGDVYDKLFQLATGNIIVTALGFLPGYYFTLFLIDIVGRKKLQFMGFIMSG---LFLAILAGEIDHIGKGPLLACFTFMQFFFNFGANTTTFIVAAELFPTRIRASAHGISAAAGKCGAILSSLVFNQLKAKIGTSAVLWIFFSTCILGFISTFLIDETMGVDPDE--KDLEE--RRAR------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4J05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -258946 for 2584 contacts (-100.2/contact) +
2D Compatibility (PS) -33730 + (NN) -9549 + (LL) 12972
1D Compatibility (HY) -22400 + (ID) 4100
Total energy: -315753.0 ( -122.20 by residue)
QMean score : 0.235
|
|
|