Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFNDLLQQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPTHHCRPPADANLSKNGGLEVWLPRDRQGQPESCLRFTSPQWGLPFLNGTEANGTGATEPCTDGWIYDNSTFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAMVFGYLADRLGRRKVLILNYLQTAVSGTCAAFAP----------NFPIYCA--------FRLLSGMALAGISLNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFLLAGVAYAVPH-----------WRHLQLLVSAPFFAFFIYSWFFIESARWHSSSGRLDLTLRALQRVA--RINGKREEGAKLSMEVLRASLQKELTMGKGQASAMELLRCPTLRHLFLCLSMLWFATSFAYYGLVMDLQGFGVSIYLIQ-VIFGAVDLPAKLVGFLVINSLGRRPAQ-MAALLLA-GICILLNGVIPQDQSIVRTSLAVLGKGCLAASFNCI-FLYTGELYPTMIRQTGMGMGSTMARVG----SIVSPLVS----MTAELYPSMPLFIYGAVPV-AASAVTVLLPETLGQPLPDTVQDLESRWAPTQKEAGIYPRKGKQTRQQQEHQKYMVPLQASAQEKNGL |
| 4GBZ Chain:A ((65-479)) | ---------------------------------------------------------------------------------------------------------------------------------------------LIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVML---SIFQQFVGINVVLY-----YAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGK----TLEELEALWE--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253353 for 3123 contacts (-81.1/contact) +
2D Compatibility (PS) -38381 + (NN) -10307 + (LL) 10740
1D Compatibility (HY) -28800 + (ID) 4500
Total energy: -324601.0 ( -103.94 by residue)
QMean score : 0.286
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