Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFEELLSQVGGLGRFQMLHLVFILPSLMLLIPHILLENFAAAIPGHRCWVHMLDNNTGSGNETGILSEDALLRISIPLDSNLRPEKCRRFVHPQWQLLHLNGTIHSTSEADTEPCVDGWVYDQSYFPSTIVTKWDLVCDYQSLKSVVQFLLLTGMLVGGIIGGHVSDRFGRRFILRWCLLQLAITDTCAAFAP----------TFPVY--------CVLRFLAGFSSMIIISNNSLPITEWIRPNSKALVVILSSGALSIGQIIL----------GGLAYVFRD-WQTLHVVASVPFFVFFLLSRWLVESARWLIITNKLDEGLKALRKVARTNGIKNAEETLNIEVVRSTMQEELDAAQTKTTVCDLFRNPSMRKRICILVFLRFA--NTIPFYGTMV-NLQHVGSNIFLLQ-VLYGAVALIVRCLALLTLNHMGRRISQIL--FMFLVGLSILANTFVPKEMQTLRVALACLGIGCSAATFSSVA-VHFIELIPTVLRARASGIDLTASRIGAALA----PLL----MTLTVFFTTLPWIIYGIFPIIGGLIVF-LLPETKNLPLPDTIKDVENQKKNLKEKA |
| 4GC0 Chain:A ((65-479)) | --------------------------------------------------------------------------------------------------------------------------------------------------------LIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKI--------MGNTLATQAVQE-IKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -266626 for 3093 contacts (-86.2/contact) +
2D Compatibility (PS) -38142 + (NN) -10321 + (LL) 11692
1D Compatibility (HY) -34400 + (ID) 4500
Total energy: -342297.0 ( -110.67 by residue)
QMean score : 0.244
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