Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFQDLLDQVGGLGRFQILQMVFLIMFNVIVYHQTQLENFAAFILDHRCWVHILDNDTIPDNDPGTLSQDALLRISIPFDSNLRPEKCRRFVHPQWKLIHLNGTFPNTSEPDTEPCVDGWVYDQSSFPSTIVTKWDLVCESQPLNSVAKFLFMAGMMVGGNLYGHLSDRFGRKFVLRWSYLQLAIVGTCAA---------------------FAPTILVYCSLRFLAGAATFSIIVNTVLLIVEWITHQFCAMALTLTLCAASIGHITLGSLAFVIR------------------DQCILQLVMSAPCFVFFLFSRWLAESARWLIINNKPEEGLKELRKAAHRNGMKNAEDILTMEVLKSTMKQELEAAQKKHSLCELLRIPNICKRICFLSFVRFAS-TIPFWGLTLHLQHLG--NNVFLLQTLF-GAVTLLANCVAPWALNHMSRRLSQMLLMFLLATCL--LAIIFVPQE--MQTLRVVLATLGVGAASLGITCSTAQENELIPSIIRGRATGITGN---FANIGGALASLMM-----ILSIYSRPLPWIIYGVFAILSGLVVL-LLPETRNQPL--LDSIQDVENEGVNSLAAPQRSSVL |
| 4GBY Chain:A ((67-479)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------GCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIY---RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECI-------PALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKI-----MGNT---LATQAVQE-IKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLL-SEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -263894 for 2983 contacts (-88.5/contact) +
2D Compatibility (PS) -36555 + (NN) -15713 + (LL) 13060
1D Compatibility (HY) -33600 + (ID) 4400
Total energy: -341102.0 ( -114.35 by residue)
QMean score : 0.243
|
|
|