Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METVPPAVDLVLGASACCLACVFTNPLEVVKTRLQLQGELQARGTYPRPYHGFIASVAAVARADGLWGLQKGLAAGLLYQGLMNGVRF-YCYSLACQAGLTQQPG------GTVVAGAVAGALGAFVGSPAYLIKTQLQAQTVAAVAVG-HQHNHQTVLGALETIWRQQGLLGLWQGVGGAVPRVMVGSAAQLATFASAKAWVQKQQWLPEDSWLVALAGGMISSIAVVVVMTPFDVVSTRLYNQPVDTAGRGQLYGGLTDCMVKIWRQEGPLALYKGLGPAYLR-LGPHTILSMLFWDELRKLAGRAQHKGT |
| 4C9Q Chain:A ((28-313)) | ------AINFLMGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMFGFKKE-GYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKS-----ARQFNGLT--DVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPL-----------FLASFLLGWVVTTGASTCSYPLDTVRRRM----MMTSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISM--YDQLQMILFGK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -88391 for 1975 contacts (-44.8/contact) +
2D Compatibility (PS) -26987 + (NN) -3507 + (LL) 2424
1D Compatibility (HY) -15200 + (ID) 3450
Total energy: -135111.0 ( -68.41 by residue)
QMean score : 0.198
|
|
|