Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPALAVGLVFAGCCSNVIFLELLARKHPGCGNIVTFAQFLFIAVEGFLFEADLGRKPPAIPIRYYAIMVTMFFTVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIALVSVGIFICTFMSAKQVTSQSSLSENDGFQAFVWWLLGIGALTFALLMSARMGIFQETLYKRFGKHSKEALFYNHALPLPGFVFLASDIYDHAVLFNKSELYEIPVIGVTLPIMWFYLLMNIITQYVCIRGVFILTTECASLTVT-LVVTLRKFVSLIFSILYFQNPFTLWHWLGTLFVFIGTLMYTEVWNNLGTTKSEPQKDSKKN |
2I68 Chain:A ((42-104)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASFWLLAQTLA-----IAYAIWSGVGIVLISLLSWGFFG------AIIGMMLICAGVLIINLL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I68.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16618 for 207 contacts (-80.3/contact) +
2D Compatibility (PS) -4962 + (NN) -512 + (LL) 22944
1D Compatibility (HY) -4800 + (ID) 150
Total energy: -4098.0 ( -19.80 by residue)
QMean score : -0.401
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