Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPEAKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGPKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIVRPP---FLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKWYQSSK |
| 3UM7 Chain:A ((200-282)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LFLLIGCLLFVLTPTFVFCYMEDWSKLEAIYFVIVTLTTVGFGDYVAGAD------PRQDSPAYQPLVWFWILLGLAYFASVLTTIGNWLRVVSRRT--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20876 for 456 contacts (-45.8/contact) +
2D Compatibility (PS) -7737 + (NN) 2409 + (LL) 20980
1D Compatibility (HY) -7600 + (ID) 1150
Total energy: -13974.0 ( -30.64 by residue)
QMean score : -0.055
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