Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGYDPKPDGRNNTKFQVAVAGSVSGLVTRALISPFDVIKIRFQLQHERLSRSDPSAKYHGILQASRQILQEEGPTAFWKGHVPAQILSIGYGAVQFLSFEMLTEL-----VHRGSVYDAREFSVHFVCGGLAACMATLTVHPVDVLRTRFAA--QGEPKVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNENLQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEHARAAFGQVRRYKGLMDCAKQVLQKEGALGFFKGLSPSLLKAALSTGFMFFSYEFFCNVFHCMNRTASQR |
4C9H Chain:A ((30-302)) | ---------------------GGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIR---YFPTQALNFAFKDKIKAMFGFKKEEGY-AKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADS---ARQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLK----------------LASFLLGWVVTTGASTCSYPLDTVRRRMMM--------TSGQAVKYDGAFDCLRKIVAAEGVGSLFKGCGANILRGVAGAGVISMYDQLQMILFGKKFK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80765 for 1857 contacts (-43.5/contact) +
2D Compatibility (PS) -25680 + (NN) -987 + (LL) 2384
1D Compatibility (HY) -14800 + (ID) 3900
Total energy: -123748.0 ( -66.64 by residue)
QMean score : 0.098
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