Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFKAFDTFKEKILKPGKEGVKNAVGDSLGILQRKIDGTTEEEDNIELNEEGRPVQTSRPSPPLCDCHCCGLPKRYIIAIMSGLGFCISFGIRCNLGVAIVEMVNNSTVYVDGKPEIQTAQFNWDPETVGLIHGSFFWGYIMTQIPGGFISNKFAANRV--FGAAIFLTSTLNMFIPSAARVHYGCVMCVRILQGLVEGVTYPACHGMWSKWAPPLERSRLATTSFCGSYAGAVVAMPLAGVLVQYI---------GWS---------SVFYIYGMFGIIWYMFWLLQAYECPAAHPTIS-NEEKTYIETSIGEGANVVSLSK-----FSTPWKRFFTSLPVYAIIVANFCRSWTFYLLLISQPAYFEEV-FGFAISKVGLLSAVPHMVMTIVVPIGGQLADYLRSRQILTTTAVRKIMNCGGFGMEATLLLVVGFSHTKGVAISFLVLAVGFS----GFAISGFNVNHLDIAPRYASILMGISNGVGTLSGMVCPLIVG---AMTRHKTREEWQNVFLIAALVHYSGVIFYGVFASGEKQEWADPENLSEEKCGIIDQDELAEEIELNHESFASPKKKMSYGATSQNCEVQKKEWKGQRGATLDEEELTSYQNEERNFSTIS |
| 4LDS Chain:A ((43-417)) | -------------------------------------------------------------------------------------------------------------------------------TEGIVVSSMLIGAIVGAGSSGPLADKLGRRRLVMLIAIVFIIGALIL----AASTNLALLIIGRLIIGLAVGGSMSTV---------PVYLSEMAPTEYRGSLGSLNQLMITIGILAAYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLLENRNEEAARQVMKITYDDSEIDKELKEMKEINAISESTWTVIKSPW---LGRILIVGCIFAIFQQFIGINAVIFYSSSIFAKAGLGEAASILGSVGIGTINVLVTIVAIF-----------VVDKIDRKKLLVGGNIGMIASLLIMAILIWTIGIASSAWIIIVCLSLFIVFFGISWGPVLWVMLPELFPMRARGAATGISALVLNIGTLIVSLFFPILSDALSTEW--VFLIFAFIGVLAMIFVIKFLPETRG---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -276069 for 2668 contacts (-103.5/contact) +
2D Compatibility (PS) -33003 + (NN) 6167 + (LL) 13112
1D Compatibility (HY) -29600 + (ID) 4250
Total energy: -323643.0 ( -121.31 by residue)
QMean score : 0.132
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