Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTIHLFRKPQRSFFGKLLREFRLVAADR----RSWK-------------ILLFGVINLICTGFLLMWCSSTNSI------------ALTAYTY-----------------------LTIFDLFSLMTC-------------LISYWVTLRKPSPVYSFGFE-------RLEVLAVFASTV----LAQL----GALFILKESAERFLEQ-PEIHTGRLLVGTFVALCFNLFTMLSIRNKPFAYV--SEAASTSWLQEHVADLSRSLCGIIPG-------LSSIFLPRMNPFVLIDLAGAFALCITYM-------LIEINN---YFAVDTASAIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEHFWTLGFGSLAGSVHVRIRRDANEQMVLA---HVTNRLYTLVSTL----TVQIFKDDWIRPALLSG------------PVAANVLNFSDHHVIPMPLLKGTDDLNPVTSTPAKPSSPPPEFSFNTPGKNVNPVILL------NTQTRPYGFGLN-----------HGHTPYSSMLNQGLGV------PGIGATQGLRTGFTN------IPSRYGTN--NRIGQPRP------------------------------ |
| 3VSM Chain:A ((27-659)) | --NIQELQNFERWFKNNLSYSFSQKAEKVVNPNRNWNDNTVFDNLSPWTSVPDFGTVCHTLIGYCVRYNNTSDTLYQNPELAYNLINGLRIICSKLPDPPPHQQAPWGPVADWYHFTITMPEVFMNITIVLNETQHYDEAASLTRYWLGLYLPTAVNSMGWHRTAGNSMRMGVPYTYSQMLRGYSLAQIRQEQGIQEILNTIAFPYVTQGNGLHVDSIYIDHIDVRAYGYLINSYFTFAYYTYYFGDEVINTVGLTRAIENVGSPEGVVVPGVMSRNGTLYSNVIGNFITYPLAVHSADYSKVLTKLSKTYYGSVVGVTNRLAYYESDPTNNIQAPLWTMAR----RIWNRRGRIINYNANTVSFESGIILQ--SLNGIMRIPSGTTSTQSFRPTIGQTAIAKTDTAGAILVYAKFAEMNNLQFKSCTLFYDHGMFQLYYNIGVEPNSLNNTNGRVIVLSRDTSVNTNDLSFEAQRINNNNSSEGTTFNGVVCHRVPITNINVPSLTVRSPNSSVELVEQIISFQTMYTATASACYKLNVEGHSDSLRAFRVNSDENIYVNVGNGVKALFNYPWVMVKENNKVSFMSANEDTTIPFSVIMNSFTSIGEPALQYSPSNCFVYGNGFKLNNSTFDLQFIFEIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VSM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225721 for 3363 contacts (-67.1/contact) +
2D Compatibility (PS) -46941 + (NN) -7496 + (LL) 568
1D Compatibility (HY) -23200 + (ID) 4500
Total energy: -307290.0 ( -91.37 by residue)
QMean score : 0.228
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