Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMKLARKSVPFIIAVALLAACLLAVGLSPLVLPDYKGTIEEREQPQNFNLLYLNSGEELNLYPWNLYTGQEQELFEEEIVSFAANSVRILGGGSWTDEELYPLIK------------FR-YSGQDLRFLKDMALTE-KDGRRYLVNMALDPNGLCYFSYVNQDEREATADEMDQALGKLQEDWEKFLSDPLPADSEVDLYEEKPSGSYQLDDGELKTDNAFYMFFMRCQMLSDQMRKEQYSDYIGDNLYTIWELVLKSEFTSLSYDNHIYAMYSNDGGTSMVLIYSPIEERFVGFSLKY |
3TJJ Chain:A ((120-237)) | ---------------------------------------------------------------FTFV-PTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQY---------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TJJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -18551 for 604 contacts (-30.7/contact) +
2D Compatibility (PS) -11243 + (NN) -6610 + (LL) 12256
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -29248.0 ( -48.42 by residue)
QMean score : 0.130
|
|
|