Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIMKKKILAYALSALTCGLFTSCSDWLDINHDPNTAEKVDPGY-------LFNYVAVNWAGTRTGGDFY--IPLSMSSQCQVDGGLD--Y-GGWDESVYTISPYSTGNTWKHYYSVGGNNLMLAIKNAEEADPVNHNAIAQCKILLAEHMYEATMLWGDIPFTESW-NGTIKYPKFDSQESVLNGVLSLLDEALQIMDLND-ANAIDEYDIYYKGDMNKWMTLAKSLKFRTLMVMVD-----KDPSKATAIGTLLQAGGMVSSASDNLVFPYSAEPGNQNPKYELIELVGGTQILFFASNYMLKPMQERNDPRIPCYFEPGA----------DG-VYRGLGNREPAVTDDKDNMLSSVVSSYLFRKDAPELIYSCQEQLLLEAEAYARGLGVAQNLSKANELYKKGIREACAFYGVAEADIDTYVTGL--------PE-----------------L----TALTQEKALYEIHMQQWIDLMDRPFEEFVQWRRSGTAGNEVPTLQVP-EDATSKELIRRWEYSPEEMTANINAPKE-------------SPKIWEKLWFDL |
| 4F53 Chain:A ((23-519)) | ------------------------------------------VDWYLVRSLALNLQDLMMPEQ-ENFSQYVDCLMAGAFSGYVADSNLGTGWSGRYATYNPSDDWKKIPFNDFYSKFYPDYFNLKNQSDD-----ELFLSLAELYRIVVMLRVTDTYGPIPYSKVGAAN-AIKSPYDSQQAVYAKMLEDLDNIITVLGKFGNQSFSSSADRIYNGNTSAWYKFANSLKLRMAMRTCYVAGFNVNGKTSQQLAEEAVAAGVMTAATDGAYRK-VA--DH-NPWQRFM----VLWSDARISADLTCYMNAYNDPRREAYYDKSTFGTVSGNAYTGEESYVGLRRGILQGQYN---SWSQGSSCMKVTTSDNIVVFRASEVAFLRAEGALRNWNMG---GTAKDFYEEGIRLSFEENGITS-GVENYLASTGKVEAYKDPLKGQSAQTYDYSGAINTNVTVAWSGGDFEKSLEQIITQKWIANFPNGMESWTEYRRTGYPKLMPMAANASGGIVNDAEGARRMPYPTDEYRENRESVEAAVATLTQESKTKRGDTMATHVWWDC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F53.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79432 for 3729 contacts (-21.3/contact) +
2D Compatibility (PS) -44530 + (NN) -17515 + (LL) 3444
1D Compatibility (HY) -6000 + (ID) 3950
Total energy: -147983.0 ( -39.68 by residue)
QMean score : 0.303
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