Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLLLITLLIGYIYPCVAQDKPIRTEESLEGTVIYKKTTTFEVDG--YTYQCDVDDGSQFVTLYNKENKLTYEKIVYKDTGKTYIGSWSSNVIEYDRFMSQQADFIVDQAFTKAMADEIGKTELMITMLLSPNTGEVMEVNFNFFTFEPYAKVPLHVYREIEVKLKEQIHFKPIEEGKQLNYIMLAWMQKPQGKLPPLPPPGSLM |
1R77 Chain:A ((264-362)) | ------------------DDDKVKLYKTNKYGTLYKSESASFTANTDIITRLTGPFRSMPQSGVLRKGLTIKYDEVMKQD-GHVWVGYNTNS------GKRVYLPVRTWNESTGELGPLWGTIK---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1864 for 643 contacts (2.9/contact) +
2D Compatibility (PS) -10354 + (NN) -2301 + (LL) 8712
1D Compatibility (HY) 400 + (ID) 650
Total energy: -2329.0 ( -3.62 by residue)
QMean score : 0.175
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