Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKINLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQPDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIEDSKWYPMFDEFRKSARKLSEEFNTIFVPFQSGFDAAVKLAPARYWSNDGVHPDLPGRQLMANMWMEATGLK---- |
| 1IVN Chain:A ((1-179)) | ---------------------------------------------ADTLLILGDSLSAGYRMSASA----------AWPALLNDK------WSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLRG------FQPQQTEQTLRQILQDVKAA--NAEPLLMQIRLPANYGR-------RYNEAFSAIYPKLAKEFDVPLLPF---FMEEV-YLKPQWMQDDGIHPNRDAQPFIADWMAKQL--QPLVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74616 for 1416 contacts (-52.7/contact) +
2D Compatibility (PS) -20132 + (NN) -15025 + (LL) 5160
1D Compatibility (HY) -5600 + (ID) 1900
Total energy: -112113.0 ( -79.18 by residue)
QMean score : 0.256
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