Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MIFLA---ILDLKSLV-------LNAINYWGPKNNNGIQGGDFGYPISE------KQIDTSIITSTHPR--------------------LIPHDLTIPQNLE----TIFTTTQVLTNNTDLQQSQTVSFAKKTTTTTSTSTTNGWTEGGKISDTLEEKVSVSIPFIGEGGGKNSTTIEANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDSTEHYSGY---------------PILTWISSPDNSYNGPFMSWYFANWPNLPSGFGPLN-----SDNTVTYTGSVVSQVSAGVYATVRFDQYDIHNLRTIEKTWYARHATLHNGKKIS----------INNV-TEMAPTSPIKTN |
| 1PRE Chain:A ((85-470)) | IPTLSALDIPDGDEVDVQWRLVHDSANFIKPTSYLAHYLGYAWVGGNHSQYVGEDMDVTRDGDGWVIRGNNDGGCDGYRCGDKTAIKVSNFAYNLDPDSFKHGDVTQSDRQLVKTVVGWAVNDP--QSGYDVTLRYDTATNWSKTNT--YGLSEKVTTKNKFKWPL------VGETELSIEIAANQSWASQNGGSTTTSLSQSVRPT----VPARSKIPVKIELYKADISYPYEFKADVSYDLTLSGFLRWGGNAWYTHPDNRPNWNHTFVIGPYKDKASSIRYQWDKRYIPGEVKWWDWNWTIQQNGLSTMQNNLARVLRPVRAGITGDFSAESQFAGNIEI--GAPVPLGLRLEIPLDAQELSGLGFNNVSLSVTPAANQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 225 for 1943 contacts (0.1/contact) +
2D Compatibility (PS) -31650 + (NN) -15767 + (LL) 680
1D Compatibility (HY) -4800 + (ID) 2250
Total energy: -53562.0 ( -27.57 by residue)
QMean score : 0.145
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