Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARK--LTPPQISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEDSSSNGELVFKRYEQR |
3CT5 Chain:A ((8-52)) | --------------------YLTMSEMKVNAQYILNYLSSNGWTKQAICGMLGNMQSESTINPGL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8917 for 246 contacts (-36.2/contact) +
2D Compatibility (PS) -4426 + (NN) 27 + (LL) 14328
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -2188.0 ( -8.89 by residue)
QMean score : 0.112
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