Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQQFQTIALIGIGLIGSSIARDIREKQLAGTIVVTTRSEATLKRAGELGLGDRYTLSAAE----AVEGADLVVVSVPVGASGAVAAEIAAHLKPGAIVTDVGSTKGSVIAQMAPHLPKDVHFVPGHPIAGTEHSGPDAGFAGLFRGRWCILTPPAGTDEEA--------VARLRLFWETLGSMVDEMDPKHHDKVLAIVSHLPHIIAYNIVGTADDLETVTESEVIKYSASGFRDFTRLAASDPTMWRDVCLHNKDAILEMLARFSEDLASLQRAIRWGDGDKLFDLFTRTRAIRRSIVQAGQDTAMPDFGRHAMDQK |
3KTD Chain:A ((7-294)) | ---ISRPVCILGLGLIGGSLLRDLHAANH--SVFGYNRSRSGAKSAVDEGFD--VSADLEATLQRAAAEDALIVLAVPMTAIDSLLDAVHTHA-PNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMAGTA-SGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETL-AIVGD---NGGALSLSLAAGSYRDSTRVAGTDPGLVRAMCESNAGPLVKALDEALAILHEAREGLTA-EQPNIEQLADNGYRSRIRYEAR----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117720 for 2132 contacts (-55.2/contact) +
2D Compatibility (PS) -30009 + (NN) -13523 + (LL) 1616
1D Compatibility (HY) -12000 + (ID) 3450
Total energy: -175086.0 ( -82.12 by residue)
QMean score : 0.410
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