Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------------------------------------------------MITYKKLL--DELKKEIGPIAKIF--LNKAMESLGYDDVDDSNYKEILSVLKMNKELREYVEIVEERLEKEG----
3DUH Chain:C ((1-170))
LRAVPGGSSPAWTQCQQLSQKLCTLAWSAHNDVPHIQCGDGCDPQGLRDNSQFCLQRIHQGLIFYEKLLGSDIFTGEPSPVGQLHASLLGLSQLLQPEGHHWETWQRLLLRFKILRSLQAFVAVAARVFAHGAATLS
General information:
TITO was launched using:
RESULT:
Template:
3DUH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24698 for 357 contacts (-69.2/contact) +
2D Compatibility (PS) -7766 + (NN) -8709 + (LL) 0
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -47073.0 ( -131.86 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_3DUH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DUH-query.scw
PDB file :
Tito_Scwrl_3DUH.pdb
: