Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYRPFGSTGVAVSALTLRLAD-NPR-LRANDWRALVFTALENGVNSFQIDGDAP----ELLKGAGEAFAS---VERHLLFLTWRLRG----D--AKQLGPHTLDALKRSAFEGLSLDYLDLLLINDPQSASLPMAFESGLQDLQKGRALRGLGVASRGDIDPG----LLA--NDLVTAVSSPYNLSSGWAE-RHRIRQASQNNFAVIGEDFWPQALREVADKAPPKPSFWQRR--TDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVV-ERDLPTGVCAQIEMARFSAQEREKAARRP |
3N6Q Chain:A ((13-331)) | MQYRYCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL-----------LTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQH-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120287 for 2260 contacts (-53.2/contact) +
2D Compatibility (PS) -28790 + (NN) -7947 + (LL) 1556
1D Compatibility (HY) -11600 + (ID) 2400
Total energy: -169468.0 ( -74.99 by residue)
QMean score : 0.354
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