Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SSSVWGVAFSP-DGQTIASASDDKTVKLWNRN------GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQ--TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH
3FRX Chain:A ((17-236))
NGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPN--SVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-
General information:
TITO was launched using:
RESULT:
Template:
3FRX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47310 for 1676 contacts (-28.2/contact) +
2D Compatibility (PS) -22700 + (NN) -20442 + (LL) -8
1D Compatibility (HY) -11600 + (ID) 3900
Total energy: -105960.0 ( -63.22 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_3FRX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FRX-query.scw
PDB file :
Tito_Scwrl_3FRX.pdb
: