Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTSVWGKSILALVFTFMCSLAISAASPKDYLYDTKEENGKIISKVVFLQENGLLNKQVRYEFQYNENGKVSEKKAFRWDRTNDEWVPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS
1C8C Chain:A ((1-64))
---------------------------------------------------------MATVKFKYK-----GEEKQVDISKIKKVWRVGKMISFTYDEGGG--KTGRGAVS--EKDAPKELLQMLAKQ---KK---
General information:
TITO was launched using:
RESULT:
Template:
1C8C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10816 for 403 contacts (-26.8/contact) +
2D Compatibility (PS) -6838 + (NN) -1574 + (LL) 5336
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -16192.0 ( -40.18 by residue)
QMean score : 0.084
(partial model without unconserved sides chains):
PDB file :
Tito_1C8C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C8C-query.scw
PDB file :
Tito_Scwrl_1C8C.pdb
: