Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SDTRKAIDTISNLLKIKPIYIESMLQEMGPRQTQMFIRSTSNGSAEEVRKAAYLVFIYHTFIKNPSDENVELWRNTLIRAQISPILAAEHTDAALFYFAELDLDAFELAQFRRHYNLHFNPEPGTLLH
4IGA Chain:A ((7-52))
----------------------------------------------------------RVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPD------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IGA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19095 for 277 contacts (-68.9/contact) +
2D Compatibility (PS) -4930 + (NN) -3525 + (LL) 6372
1D Compatibility (HY) -800 + (ID) 350
Total energy: -22328.0 ( -80.61 by residue)
QMean score : 0.106
(partial model without unconserved sides chains):
PDB file :
Tito_4IGA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IGA-query.scw
PDB file :
Tito_Scwrl_4IGA.pdb
: