Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVLLLVFLSLTWLSASAQALVPITWTAYGLTFEAPKGILVEEDTEETFLLN--------N--SRFYITIQSLDSDGMTKSDLKSVLKDYANDD-GVKDQSAVQEFELPQFFGTYLKGSCETDHC--LYA---CLMTKAAGSGFYISIIYSKENE------NIAEKILKSFTMEE |
| 3LYD Chain:A ((17-158)) | ----------------------------LTGFTVPIPETWQPD--PTMGTQFAARPHTPPQGFTPNIIGTVRRAATG--ALHNQRTELDQRATQLPDYAER-GRTETTVDGFPAYHIEYAYRHHGTITIAQMITLVEVSHPHAVDIIQLTATCAGDQTADYWDTFRLMHADLTVQ- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -74911 for 766 contacts (-97.8/contact) +
2D Compatibility (PS) -12821 + (NN) -4467 + (LL) 3416
1D Compatibility (HY) 0 + (ID) 500
Total energy: -89283.0 ( -116.56 by residue)
QMean score : 0.283
|
|
|