Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
PYLKEKSSATVYFQTVKHNNIRDLVRRCITRTSQVLVILMDVFTDVE---IFCDILEAANKR--GVFVCVLLDQG-------GV---KLFQEMCDKVQISDSHLKNISIRSVEGEIYC-AKSGRKFAGQIREKFIISDWRFVLSGSYSFTWLCGHV----HRNILSKFTGQAVELFDEEFRHLYASSKPVMGLKSP
3HSI Chain:A ((22-192))
----QAEQIEFLGSSA---EFKTQIIELIRNAKKRIYVTALYWQKDEAGQEILDEIYRVKQENPHLDVKVLIDWHRAQRNLL--ATNADWYCEQRQTY------QLPDDPN----FFGVPINTREVFGVLHVKGFVFDDTVLYSG-ASINNVYLHQFEKYRYDRYQKITHAELADSMVNFINDYL-----------
General information:
TITO was launched using:
RESULT:
Template:
3HSI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91043 for 1001 contacts (-91.0/contact) +
2D Compatibility (PS) -15416 + (NN) -3712 + (LL) 900
1D Compatibility (HY) 1600 + (ID) 650
Total energy: -108321.0 ( -108.21 by residue)
QMean score : 0.224
(partial model without unconserved sides chains):
PDB file :
Tito_3HSI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HSI-query.scw
PDB file :
Tito_Scwrl_3HSI.pdb
: