Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | GEEKMTNGQLWKKVKDSLIDSNIISGNENEEITVTYVNKTGYSSSVSAYGNNNDDFSSTPSNFSKLKEIDLKKDNVPSDDFNTTVSGEDSWKTLTSKLKEKGLVTDGQTVTIHCNDKSDNTKSSVSGKVGADLTSGNGTTFKKRFIDKITID |
3IJW Chain:A ((16-41)) | -----------------------------------------------------------------------------------------TIKTITNDLRKLGL-KKGMTVIVHSSL------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 772 for 90 contacts (8.6/contact) +
2D Compatibility (PS) -3111 + (NN) -3056 + (LL) 3828
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -4067.0 ( -45.19 by residue)
QMean score : 0.101
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