Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIV-----RIPKEQGVLSFWRGNLANVIRY-FPTQALNFAF-----KDKYKQIFLGGVDKHTQFWRYFAG-------NLASGGAAGAT------SLCFVYPLDFARTRLAADVGKSGTEREF-RGLGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKN-THIVVS----WMIAQTVTAVAG---VVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI |
| 4R8G Chain:E ((5-332)) | RRQSLATKIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAAQTIRRLIRGFILRHSPRCPENAFFLDHVRASFLLNLRRQLPRNVLDTSWPTPPPALREASELLRELCMKNMVWKYCRSISPEWKQQLQQKAVASEIFKGKKDNYPQSVPRLFISTRLGTEEISPRVLQSLGSEPIQYAVPVVKYDR-----KGYKPRPRQLLLTPSAVVIVEDAKVKQRIDYANLTGISVSSLSDSLFVLHVQKQKGDVVLQSDHVIETLTKTALSADRVNNININQGSITFAGGPGRD--GIIDFTSGSELLITKAKNGHLAVVAPRL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R8G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96087 for 1703 contacts (-56.4/contact) +
2D Compatibility (PS) -30881 + (NN) -9534 + (LL) 856
1D Compatibility (HY) -5200 + (ID) 2350
Total energy: -143196.0 ( -84.08 by residue)
QMean score : 0.104
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