Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELRSGSVGSQAVARRMDGDSRDGGGGKDATGSEDYENLPTSASVSTHMTAGAMAGILEHSVMYPVDSVKTRMQSLSPDPKAQYTSIYGAL-KKIMRTEGFWRPLRGVNVMIMGAGPAHAMYFACYENMKRTLNDVFHHQGNSHLANGIAGSMATLLHDAVMNPAE--VVKQRLQMYNSQHRSAISCIRTVWRTEGLGAFYRS-YTTQLTMNIPFQSIHFITYEFLQEQVNPHRTYNPQSHIISGGLAGALAAAATTPLDVCKTLLNTQENVALSLANISGRLSGMANAFRTVYQLNGLAGYFKGIQARVIYQMPSTAISWSVYEFFKYFLTKRQLENRAPY |
| 5AJ3 Chain:G ((35-242)) | ----------------------------------------------------------------------SRYGPEYKDPQIDKEYYRKPLAEQTEEEKYERDFKKTQLIKAAPATKTSSVF---EDPVISKFTNMMMKGGNKVLARSLMTQTLEAVKRKQFAKYHAASAEEQATIERNPYTIFHQALKNCEPVIGLVPILKGGHFYQVPVPLADRRRRFLAMKWMIAECREK---KHRRVLMPEKLSQELLEAFHNQGPVIKRKHDMHKMAEANRALAHYRWW---------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5AJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -63472 for 1270 contacts (-50.0/contact) +
2D Compatibility (PS) -20967 + (NN) 229 + (LL) 7920
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: -78490.0 ( -61.80 by residue)
QMean score : 0.045
|
|
|