Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQTKGGQTWARRALLLGILWATAHLPLSGTSLPQRLPRATGNSTQCVISPSSEFPEGFFTRQERRDGGIIIYFLIIVYMFMAISIVCDEYFLPSLEIISESLGLSQDVAGTTFMAAGSSAPELVTAFLGVFITKGDIGISTILGSAIYNLLGICAACGLLSNTVSTLSCWPLFRDCAAYTISAAAVLGIIYDNQVYWYEGALLLLIYGLYVLVLCFDIKINQYIIKKCSPCCACLAKAMERSEQQPLMGWEDEGQPFIRRQSRTDSGIFYEDSGYSQLSISLHGLSQVSEDPPSVFNMPEADLKRIFWVLSLPIITLLFLTTPDCRKKFWKNYFVITFFMSAIWISAFTYILVWMVTITGETLEIPDTVMGLTLLAAGTSIPDTIASVLVARKGKGDMAMSNIVGSNVFDMLCLGIPWFIKTAFINGSAPAEVNSRGLTYITISLNISIIFLFLAVHFNGWKLDRKLGIVCLLSYLGLATLSVLYELGIIGNNKIRGCGG |
| 4K1C Chain:A ((27-406)) | ------TAWRAAVYDLQYILKASPLNFLLVFVPLGLIWGHFQLS--------------------HTLTFLFNFLAIIPLAAILANATEELADKA-----------GNTIGGLLNATFGNAVELIVSIIALKKGQVRIVQASMLGSLLSNLLLVLGLCFIFGGYNRV---------------------QQTFNQTAAQTMSSLLAIACASLLIPAAFRATLPFI------------DGKILELSRGTSIVILIVYVLFLYFQLGSHHALFEQQEEETDEVMSTIS-----RNPHHSLS---------------------------------VKSSLVILLGTTVIISFCADFLVGTIDNVVESTGLSKTFIGLIVIPIVGNAAEHVTSVLVAMKDKMDLALGVAIGS-SLQVALFVTPFMVLVGWMIDV---PMTLNFSTFETATLFIAVFLSNYLILDG--ESNWLEGVMSLAMYILIAMAFFYYPDE------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -331596 for 3314 contacts (-100.1/contact) +
2D Compatibility (PS) -38359 + (NN) 595 + (LL) 8528
1D Compatibility (HY) -18800 + (ID) 2950
Total energy: -382582.0 ( -115.44 by residue)
QMean score : 0.243
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