Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQPPPDEARRDMAGDTQWSRPECQAWTGTLLLGTCLLYCARSSMPICTVSMSQDFGWNKKEAGIVLSSFFWGYCLTQVVGGHLGDRIGGEKVILLSASAWGSITAVTPLLAHLSSAHLAFMTFSRILMGLLQGVYFPALTSLLSQKVRESERAFTYSIVGAGSQFGTLLTGAVGSLLLEWYGWQSIFYFSGGLTLLWVWYVYRYLLSEKDLILALGVLAQSRPVSRHNRVPWRRLFRKPAVWAAVVSQLSAACSFFILLSWLPTFFEETF-PDAKGWIFNVVPWLVAIPASLFSGFLSDHLINQGYRAITVRKLMQGMGLGLSSVFALCLGHTSSFCESVVF--ASASIGLQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLGGYLMETTGSWTCLFNLVAIISNLGLCTFLVFGQAQRVDLSSTHEDL |
| 4D9O Chain:A ((10-231)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------MVPPKKDMEKGVIFSDLCNFLITQTL----QGWKVYWAGIEFDVSQKGMALLTRLK--------TAMTRNLFPHLFQNPN---SVIQSPIWALRVILAAGLQDQLLDHSLVEPLTGALGLISDWLLTTTSTHFN--LRTRSVKDQLSLRMLSLIRSNILQFINKLDALHVVNYNGLLSSIEIGTSTHTIIITRTN-MGFLVEVQEV-----KFSLLHESAFKPFT------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191480 for 1492 contacts (-128.3/contact) +
2D Compatibility (PS) -20617 + (NN) -3272 + (LL) 16308
1D Compatibility (HY) -11600 + (ID) 1400
Total energy: -212061.0 ( -142.13 by residue)
QMean score : 0.224
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