Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGVCQRTRAPWKEKSQLERAALGFRKGGSGMFASGWNQTVPIEEAGSMAALLLLPLLLLLPLLLLKLHLWPQLRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRAARAFLRALGWDWGPDGGDSGEGSAGEGERAAPGAGDAAAGSGAEFAGGDGAARGGGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTALRRGPLLHCLRSCGARALVLAPEFLESLEPDLPALRAMGLHLWAAGPG-THPAGISDLLAEVSAEVDGPVPGYLSSPQSITDTCLYIFTSGTTGLPKAARISHLKILQCQGFYQLC-GVHQEDVIYLALPLYHMSGSLLGIVGCMGIGATVVLK--SKFSAGQFWEDCQQHRVTVFQYIGELCRYLVNQPPSKAERGHKVRLA--VGSGLRPDTWERFVRRFGPLQVLETYGLTEGNVATINYTG---QRGAVGRASWLYKHIFPFSLIRYDVTTGEPIRDPQGHCMATSPGEPGLLVAPV---SQQSPFLGYAGGPELAQGKLLKDVFRPGDVFFNTGDLLVCDDQGFLRFHDRTGDTFRWKGENVATTEVAEVFEALDFLQEVNVYGVTVPGHEGRAGMAALVLRPPH-----ALDLMQLYTHVSENLPPYARPRFLRLQESLATTETFKQQKVRMANEGFDPSTLSDPLYVLDQAVGAYLPLTTARYSALLAGNLRI |
| 3C5E Chain:A ((51-562)) | -----------------------------------------------------------------------------------------------------------------------------------------------EKAGKRPPS---PALWWVNGK----GKELMWNFRELSENS-QQAANVLS--------------GACGLQRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLNFKKLLNEA-------STTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDL-SSYKFPHLQNCVTVGESLLPETLENWRAQTG-LDIRESYGQTETGLTCMVSKTMKIKPGYMGTA-------ASCYDVQIIDDKG----------NVLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANI-------RGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPV-RGEVVKAFVVLASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDKEWK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -313973 for 4172 contacts (-75.3/contact) +
2D Compatibility (PS) -53125 + (NN) -25023 + (LL) 15156
1D Compatibility (HY) -17200 + (ID) 5450
Total energy: -399615.0 ( -95.78 by residue)
QMean score : 0.397
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