Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSSLAPGVWFFRAFSRDSWFRGLILLLTFLIYACYHMSRKPISIVKSRLHQNCSEQIKPINDTHSLNDTMWCSWAPFDKDNYKELLGGVDNAFLIAYAIGMFISGVFGERLPLRYYLSAGMLLSGLFTSLFG-LGYFWNIHELWYFVVIQVCNGLVQTTGWPSVVTCVGNWFGKGKRG----FIMGIWNS-HTSVGNILGSLIAGIWVNGQWGLSFIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNPEDPGNSPCSIRESGLETVAKCSKGPCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIANVAHFSAKEAGDLSTLFDVGGIIGGIVAGLVSDYTNGRATTCCVMLILAAPMMFLYNYIGQDGIASSIVMLIICGGLVNGPYALITTAVSADLGTHKSLKGNAKALSTVTAIIDGTGSIGAALGPLLAGLISPTGWNNVFYMLISADVLACLLLCRLVYKEILAWKVSLSRGSGYKEI |
| 1N25 Chain:A ((7-368)) | KQVSWKLVTEYAMETKCDD---------VLLLLGMYLEFQYS--------FEMCLKCIKKEQPSHYKY-------HEKHYANAAIFADSKNQKTICQQAVDTVLAKKRVDSLQLTREQMLTNRFNDLLDRMDIMFGSTGSADIEEWMAGVAWLHCLLP--KMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIF------PPGIVTMNEYSVPKTLQAR----FVKQIDFRPKDYLKHCLERSEFLLEK--------------------RIIQS-----GIALLLMLIWYRP------------------------------------------------------------VAEFAQSIQSRIVEWKERLDKEFS-----------------------LSVYQKMKFNVAMGIGVLD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244746 for 2746 contacts (-89.1/contact) +
2D Compatibility (PS) -36644 + (NN) -4276 + (LL) 11036
1D Compatibility (HY) -12800 + (ID) 2400
Total energy: -289830.0 ( -105.55 by residue)
QMean score : 0.181
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