Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMKLARKSVPFIIAVALLAACLLAVGLSPLVLPDYKGTIEEREQPQNFNLLYLNSGEELNLYPWNLYTGQEQELFEEEIVSFAANSVRILGGGSWTDEELYPLIKFRYSGQDLRFLKDMALTEK-DGRRYLVNMALDPNGLCYFSYVNQDEREATADEMDQALGKLQEDWEKFLSDPLPADSEVDLYEEKPSGSYQLDDGELKTDNAFYMFFMRCQMLSDQMRKEQYSDYIGDNLYTIWELVLKSEFTSLSYDNHIYAMYSNDGGTSMVLIYSPIEERFVGFSLKY |
3ZL5 Chain:A ((142-198)) | ---------------------------------------------------------------------------------------------------------------KQEISKAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQF---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZL5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17015 for 286 contacts (-59.5/contact) +
2D Compatibility (PS) -5901 + (NN) -1999 + (LL) 15460
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -11255.0 ( -39.35 by residue)
QMean score : 0.064
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