Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMVMKRPSLRQFSWLLGGSLLLGALFWLWLAVQQQEATLAIRPVGQGIGMPDGFSVWHHLDANGIRFKSITP---------QKDGLLIKFDSTAQGAAAKEVLGRALPHGYIIALLEDDNSPTAWLSRLRDAPHRLG
4A8X Chain:A ((159-233))
----------------------------------KPTKVHIGRLTRNVTKD---HIMEIFSTYG-KIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEI------------------------
General information:
TITO was launched using:
RESULT:
Template:
4A8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36735 for 449 contacts (-81.8/contact) +
2D Compatibility (PS) -7147 + (NN) -664 + (LL) 4736
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -43460.0 ( -96.79 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_4A8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A8X-query.scw
PDB file :
Tito_Scwrl_4A8X.pdb
: