Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLLLITLLIGYIYP------CVAQDKPIRTEESLEGTVIYKKTTTFEVDGYTYQCDVDDGSQFVTLYNKENKLTYEKIVYKDTGKTYIGSWS-SNVIEYDRFMSQQADFIVDQAFTKAMADEIGKTELMI---------TMLLSPNTGEVMEVNFNF-FTFEPYAKVP----LHVYREIEVKLK-------------------------------EQIHFKPIEEGKQLNYIMLAWMQKPQGKLPP----------LPPPGSLM |
| 3FPP Chain:A ((43-308)) | PGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17543 for 1139 contacts (-15.4/contact) +
2D Compatibility (PS) -21284 + (NN) 6083 + (LL) 0
1D Compatibility (HY) 4800 + (ID) 1350
Total energy: -29294.0 ( -25.72 by residue)
QMean score : 0.079
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