Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GRIPSPPSKTSLDIAEELQNDKGVSFAFQAREEELGAFTKRTLFAYSGDGLTGPFKAPASAELSSFLTAHPKGRWLIAFPLGTGIVSV---D--EGILTLEISRSLPEVGSGSSFYLTEK
3HFQ Chain:A ((291-341))
------------------------------------------------------------------FDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL-LQ-KDVTVPEGVCVRFLE-
General information:
TITO was launched using:
RESULT:
Template:
3HFQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20414 for 226 contacts (-90.3/contact) +
2D Compatibility (PS) -5410 + (NN) -4609 + (LL) 3324
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -29959.0 ( -132.56 by residue)
QMean score : 0.120
(partial model without unconserved sides chains):
PDB file :
Tito_3HFQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HFQ-query.scw
PDB file :
Tito_Scwrl_3HFQ.pdb
: