Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCRATQWLDLRFVSGPGDLLRGMVARRSEETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRKPARFDDFALPAAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYVEIVAGEHRDGHRVTTEVGVSIIDTPHGRILVHPTKAF--DGEWISTFTPG-----SADAIAMAVERLTASLPSGSWFPDQPLTRDFDEDAATHREPVLQRRTQKA |
2RRK Chain:A ((10-63)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVVAAIIERD-GKILLAQRPAQSDQAGLWEF--AGGKVEPDESQRQALVRELREELG--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8604 for 229 contacts (-37.6/contact) +
2D Compatibility (PS) -5312 + (NN) -2830 + (LL) 16284
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -3862.0 ( -16.86 by residue)
QMean score : 0.034
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