Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | QDTFIAAVYEHAAILPNATLTPVSREEALALMNRNLDILEGAITSAAD--QGAHIIVTPEDAIYGWNFNRDSLYPYLEDIPDPEVNWIPCNNRNRFGQTPVQERLSCLAKNNSIYVVANIG-DKKPCDTSDPQCPPDGRYQYNTDVVFDSQGKLVARYHKQNLFMGENQFNVPKEPEIVTFNTTFG-SFGIFTCFDILFHDPAVTLVKDFHVDTIVFPTAWMNVLPHLSAVEFHSAWAMGMRVNFLASNIHYPS--K-KMTGSGIYAPNSSRAFHYDMKTEEGKLLLSQLDSHPSHSAVVNWTSYASSIEALSSGNKEFKGTVFFDEFTFVKLTGVAGNYTVCQKDLCCHLSYKMSENIPNEVYALGAFDGLHTVEGRYYLQICTLLKCKTTNLNTCGDSAETASTRFEMFSLSGTFGTQYVFPEVLLSENQLAPGEFQVSTDGRLFSLKPTSGPVLTVTLFGRLYEKDWASNASSG |
| 4LF0 Chain:A ((31-260)) | -------------------------------VIENAKKIADMVVGMKQGLPGMDLVVFPEYSTMGIMYDQDEMFATAASIP-----------------GEETAIFAEACKKADTWGVFSLTGEKH--E-D----HPNKA-PYNTLVLINNKGEIVQKYRKIIPWCPIDGWY-PG-DTTYVTEGPKGLKISLIVCDDGNYPEIWRDCA-MKGAELIVRCQGYMYPAKE-QQIMMAKAMAWANNTYVAVANATGFDGVYSYFGHSAIIGFDGRTLGE--CGTEENGIQYAEVSI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124363 for 1893 contacts (-65.7/contact) +
2D Compatibility (PS) -24093 + (NN) -11415 + (LL) 14216
1D Compatibility (HY) -7200 + (ID) 1800
Total energy: -154655.0 ( -81.70 by residue)
QMean score : 0.226
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