Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADCAAHDESPGNNVVDISVPPTTD
1OIV Chain:A ((24-191))
DEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIY--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1OIV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101623 for 1327 contacts (-76.6/contact) +
2D Compatibility (PS) -18529 + (NN) -9004 + (LL) 1384
1D Compatibility (HY) -23200 + (ID) 8100
Total energy: -159072.0 ( -119.87 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_1OIV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OIV-query.scw
PDB file :
Tito_Scwrl_1OIV.pdb
: