Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLNLSVDEVLTTTRSVRKRLDFDKPVPRDVLMECLELALQAPTGSNSQGWQWVFVEDAAKKKAIADVYLANARGYLSGPAPEYPDGDTRGERMGRVRDSATYLAEHMHRAPVLLIPCLKGREDESAVGGVSFWASLFPAVWSFCLALRSRGLGSCWTTLHLLDNGEHKVADVLGIPYDEYSQGGLLPIAY---TQGIDFRPAKRLPAESVTHWNGW
3G14 Chain:A ((2-178))
----MEFYEVIKKRKSIKKFE--QTAIDRDKLLKIIDMAMRAPSWKNKTPYKFIVVESDKLKLDIANAIENK---------------TS-------------AASEAVLNSPMTIVAVANPEESGDVSGKEIYLIDTAIAMEHIVLGATDEGYGTCWIAAF----NENKIKEALKIPD-NLRVVALTPLGVPKD----------KKDMDEYLYIDKW
General information:
TITO was launched using:
RESULT:
Template:
3G14.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134012 for 1308 contacts (-102.5/contact) +
2D Compatibility (PS) -18276 + (NN) -11479 + (LL) 1424
1D Compatibility (HY) -9600 + (ID) 1700
Total energy: -173643.0 ( -132.75 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_3G14.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G14-query.scw
PDB file :
Tito_Scwrl_3G14.pdb
: