Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLPDIVNMYFDADSCNDTDALSETFAPDAVVEDEG--ARHQGVVAILRWWVAAKKAAS-YVAEPLESTVDGDKALVRAKVSGRFPGSP--VTL--TYSFTIKDGRIARLEIQ
4H3U Chain:A ((26-136))
-TTPEIVTAWAAAWTGTNPNALGTLFAADGTYVDHAIGATMTGREQISGWKARTDAMIENVHVTITKAYRAGDHVTIEAVYGGHIKGAPTPFAVPMATLLRTRGEEITSDQD-
General information:
TITO was launched using:
RESULT:
Template:
4H3U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51080 for 730 contacts (-70.0/contact) +
2D Compatibility (PS) -11578 + (NN) -6676 + (LL) 328
1D Compatibility (HY) 800 + (ID) 1050
Total energy: -69256.0 ( -94.87 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_4H3U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H3U-query.scw
PDB file :
Tito_Scwrl_4H3U.pdb
: