Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLLNTLVCIIGLTSFSSSAKLVNAEHLDALYQKVTVANKTELGLIHIYSEFPDYRWVKDPIEGVSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFIL-YQRADNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQTR-GEK-EGVAVPEWLP---HTAGDQASVLLMALSDAQALEAKPEIEKMMRSLAAGIMLMQVKDT-SS--PVNGAFLSWQNLWHGYG-NS-QAYALLVAGNRLGDRDMIKAAFNELDHFHPWLIS--NGLLNEFTVRQQGEKV-----TLIE---QKKFSQIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFKNNPAQAQMYYPVTGIAFDGIDSATTV--NKN----SGAESTIEALLTLQLIESIPDAKRMLESALEKRNIKQ |
| 3GT5 Chain:A ((13-322)) | -------------------------------------------------------------------------------------------THISDTMAFYHPRCIDSAGGFFHYFRDDGSIYNATH----RHLVSSTRFVFNYAMAYLQFG--TAEYLDAVHHGLSYVRDVHR------NPATGGYAWTL--CDDRVEDDTNHCYGLAFVMLAYSCGLKV-GIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWN-FTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHY--DMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVA------RSWDAVRGGLCYGFAP-DGTICDDDKYFWVQAESLAAAALL------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90944 for 2216 contacts (-41.0/contact) +
2D Compatibility (PS) -30099 + (NN) -13201 + (LL) 11652
1D Compatibility (HY) -1600 + (ID) 1850
Total energy: -126042.0 ( -56.88 by residue)
QMean score : 0.272
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