Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQKKTYAVFLILLLMMFTAACSGSKTSAEKKESETEK-SSDIA--QVKIKDVSYTLPSKYDKSTSDD--QLVLKVNVAVKNTGKDPLNVDS------MDFTLYQGD-TKMSDTDPED-YSEKLQGSTINADKSVEGNLFFVVDK----GKQYELNYTPESYGDKKPKSVTFKIDGKD--KKILATADKLQDSAKALSAYVDVLLFGKDNADF-----------EKITGANKNEIVNDFNESAKDGYLSAS-GLSSTYADSKALDNIVNGIKEGLSKNSSIQAKTTSISKDEAIVEATVKPV--------DASSLSDRIEDKVKDYYSKNSSA--SYEEAVKYALQV--YPEEFKKLGPASSEKTVEVKMKKNDIDQWQLDMDDYRAAELVEAFIKE--------- |
| 1IHG Chain:A ((2-365)) | ----------------------SHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGELKEGDDWGIFPKDGSGDSHPDFPEDADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEG------SRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKA---------QEIAPED-----KAIQAELLKVKQKIKAQKDKEKAAY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IHG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 148806 for 2297 contacts (64.8/contact) +
2D Compatibility (PS) -32789 + (NN) -7868 + (LL) 4516
1D Compatibility (HY) 3200 + (ID) 2400
Total energy: 113465.0 ( 49.40 by residue)
QMean score : 0.173
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