Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MGELPGSEGMWENCPLGWVKKKASGTLAPLDFLLQRKR-----LWLWASEPVRPQPQG----IHRFREARRQFCRMRGSRLTGGRKGFGSSGLRFGRGGFSEEVMPQPVLKAMRCAEGAWWFSPDGPAGSAASIWPAEGAEGLPGQLGRDRLEVVYSVPDNVPGQNGSRRPLVCKITGKCLSVCSEENAKAGGCSAFPLLLSQLGARMTGREHAHKGPELTTPDSG-LPRPPNPALAGFRALAQHSPPLGTSTPSAVLLSAAT---------------------------------------- |
| 1P35 Chain:A ((1-299)) | CVIFPVEIDVSQTIIRDCQVD----KQTRELVYINKIMNTQLTKPVLMMFNISGPIRSVTRKNNNLRDRIKSKVDEQFDQLERDYSDQMDGFHDSIKYFKDEHYSVSCQN---GSVLKSKFAKILKSHDYTDKKSIEAYEKYCLPKLVDE-RNDYYVAVCVLKPGFENGSNQVLSFEYNPIGNKVIVPFAHEINDTGLYEYDVVAYVDSVQFDGEQFEEFVQSLILPSSFKNSEKVLYYNEASKNKSMIYKALEFTTESSWGKSEKYNWKIFCNGFIYDKKSKVLYVKLHNVTSALNKNVILNTIKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7243 for 1526 contacts (-4.7/contact) +
2D Compatibility (PS) -25734 + (NN) -1092 + (LL) 824
1D Compatibility (HY) -6800 + (ID) 1500
Total energy: -41545.0 ( -27.22 by residue)
QMean score : 0.066
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