Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MSALNWKPFVYGGLASITAECGTFPIDL-------TKTRLQIQGQTNDA------KFKEI---RYRGML-------HALVRIGREEGLKALYSGIAPAML--RQASYGTIKIGTYQSLKRLFIERPEDETLPINVICGIL-----SGVISSTIANPTDVLKIRMQAQSNTIQG--------GMIGNFMNIYQQ--EGTRGLW---KGVSLTA-----------QRAAIVVGVELPVYDI-----------TKKHLILSGLMGDTVYTHFLSS--FTCGLAGALASNPVDVVRTRMMNQRVLRDGRCSGYTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKKLDL---------------------------------------------------------- |
| 3ACP Chain:A ((1-417)) | MTKTITVAHIQYDFKAVLEENDENDDEFYINVDKNLNEIKEHKIVVLGNSRGVDAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTE-GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS-CNSLTVDGNNANYIYAGYENGMLAQWD-LRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDEVSQFCYVSDDESNGEVLEVGKNNFCALYNLSNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ACP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81952 for 2032 contacts (-40.3/contact) +
2D Compatibility (PS) -29527 + (NN) 6967 + (LL) 120
1D Compatibility (HY) -10000 + (ID) 2750
Total energy: -117142.0 ( -57.65 by residue)
QMean score : 0.088
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