Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------MADQ--PKPISPLKNLLAGGFGGVCLVFVG------HPLDTVKVRLQTQPP-SLPGQPPMYSGTFDCFRKTLFRE-GITGL--YRGMAAPIIGVTPMFAVCFFGFGLGKKLQQKHPEDVLSYPQLFA-----AGMLSGVFTTGIMTPGERIKCLLQIQASSGESKY--------TGTLDCAKKLYQEFGIRGIYK--------------GTVLTLMRDVPASG------MYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPNGFRDVLRELIRDEGVTSLYKGFNAVMIRAFP--------------------------ANAACFLGFEVAMKFLNWATPNL---------------- |
| 4ZFV Chain:A ((10-445)) | NVLDFTVLGLNSGTSMDGIDCALCHFYQKTPDAPMEFELLEYGEVPLAQPIKQRVMRMILEDTTSPSELSEVNVILGEHFADAVRQFAAERNVDLSTIDAIASHGQTIWLLSMPEEGQVKSALTMAEGAILASRTGITSITDFRISDQAAGRQGAPLIAFFDALLLHHPTKLRACQNIGGIANVCFIPPDVDGRRTDEYYDFDTGPGNVFIDAVVRHFTNGEQEYDKDGAMGKRGKVD--QELVDDFLKMPYFQLDPPKTTGREVFRDTLAHDLIRRAEAKGLSPDDIVATTTRITAQAIVDHYRRYAPSQEIDEIFMCGGGAYNPNIVEFIQQSYPNTKIMMLDEAGVP---------AGAKEAITFAWQGMEALVGRSIPVPTRVETRQHYVLGKVSPGLNYRSVMKKGMAFGGDAQQLPWVSEMIVKKKGKVITNNWAGSHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124538 for 2103 contacts (-59.2/contact) +
2D Compatibility (PS) -29760 + (NN) -3086 + (LL) 676
1D Compatibility (HY) -1200 + (ID) 2500
Total energy: -160408.0 ( -76.28 by residue)
QMean score : ?
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