Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGQGQSASGSSAWSTVFRHVRYENLIAGVSGGVLSNLALHPLDLVKIRFAVSDGLELRPKYNGILHCLTTIWKLDGLRGLYQGVTPNIWGAGLSWGLYFFFYNAIKSYKTEGRAERLEA-TEYLVSAAEAGAMTLCITNPLWVTKTRLMLQYDAVVNSPHRQYKGMFDTLVKIYKYEGVRGLYKGFVPGLFGTSHGALQFMAYELLKLKYNQHINRLPEAQLSTVEYISVAALSKIFAVAATYPYQV---VRARLQDQHMFYSGVI-DVITKTWRKEGVGGFYKGIAPNLIRVTPAC-----------CITFVVYENVSHFLLDLREKRK-- |
4UX8 Chain:C ((25-343)) | -DRLDCVKASDQCLKEQSCSTKYRTLRQCVAGK-------------ETNFSLTSGLEAKDECRSAMEALKQ-------KSLYNCRCKR--GMKKEKNCLRIYWSMYQSKGNNCLDAAKACNLDDTCKKYRSAYITPCTTS------------MSNEVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRD---IACTERRRQTIVPVCSYEERERPNCLSLQDSCKTNYICRSRLADFFTNCQPESRSVSNCLKENYADCLLAYSGLIGTVMTPNYVD-----------SSSLSVAPWCDCSNSGNDLEDCLKFLNFFKDNTCLKNAIQAFGNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49553 for 1946 contacts (-25.5/contact) +
2D Compatibility (PS) -27025 + (NN) 1405 + (LL) 3936
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -80437.0 ( -41.33 by residue)
QMean score : 0.158
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